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Crystal structure of DdrB from Deinococcus radiodurans bound to ssDNA
DOI:10.2210/pdb4hqb/pdb   NDB ID: NA2119
4HQB
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA Binding Protein/dna
    Structure Weight: 87248.84
    Molecule: Single-stranded DNA-binding protein DdrB
    Polymer: 1 Type: protein Length: 148
    Chains: A, B, C, D, E
    Organism: Deinococcus radiodurans
    Gene Names: ddrB DR_0070
    UniProtKB: Protein Feature View | Search PDB | Q9RY80  
    Molecule: 5'-D(*TP*TP*TP*T)-3'
    Polymer: 2 Type: dna Length: 4
    Chains: M
    Molecule: 5'-D(P*TP*TP*TP*TP*T)-3'
    Polymer: 3 Type: dna Length: 5
    Chains: N
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Deinococcus radiodurans   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
     
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  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA2119
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Sugiman-Marangos, S.N.,  Junop, M.S.

    Deposition:   2012-10-25
    Release:   2013-09-04
    Last Modified (REVDAT):   2013-12-04
     
  •   Revision History    Hide
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    2013-12-04
    Citation
    2013-09-11
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.30
    R-Value: 0.193 (obs.)
    R-Free: 0.246
    Space Group: P 32
    Unit Cell:
      Length [Å] Angles [°]
    a = 110.70 α = 90.00 
    b = 110.70 β = 90.00 
    c = 58.78 γ = 120.00