4H0E

Crystal Structure of mutant ORR3 in complex with NTD of AraR

Structural Biology Knowledgebase: 4H0E SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.97 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.219

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4H0E

Classification: TRANSCRIPTION / DNA

Total Structure Weight: 32960.64


Macromolecule Entities
Molecule Chains Length Organism Details
Arabinose metabolism transcriptional repressor A, B 88 Bacillus subtilis Fragment: N-terminus domain, UNP RESIDUES 1-68
Gene Name(s): araR araC yvbS BSU33970
Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*AP*AP*AP*TP*TP*TP*GP*TP*CP*CP*GP*TP*AP*CP*AP*TP*TP*TP*TP*AP*T)-3' U 21 synthetic
5'-D(*TP*AP*TP*AP*AP*AP*AP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*AP*AP*TP*T)-3' T 21 synthetic

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ACT
Query on ACT

B, T, U ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

T CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.97 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.219
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 137.80 α = 90.00
b = 42.62 β = 114.92
c = 67.44 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-09-08
  • Released Date: 2013-02-06
  • Deposition author(s): Nair, D.T., Jain, D.

Revision History

No revisions since initial release