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Vibrio Cholerae Cytolysin Beta-Prism Domain With Methyl-Alpha-Mannose Bound
4GX7
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Toxin
    Structure Weight: 98971.70
    Molecule: Cytolysin and hemolysin HlyA Pore-forming toxin
    Polymer: 1 Type: protein Length: 152
    Chains: A, B, C, D, E, F
    Fragment: Carbohydrate-binding domain
    Organism: Vibrio cholerae 12129(1)
    Gene Name: VCG_000884
    UniProtKB: Protein Feature View | Search PDB | C2C744  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Vibrio cholerae   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1XEZ  Water-soluble monomer with beta-octyl glucoside bound 
    3O44  Assembled heptameric channel 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MMA
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    MMA C7 H14 O6
    O1-METHYL-MANNOSE
    MMA:4GX7
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Levan, S.,  Olson, R.

    Deposition:   2012-09-04
    Release:   2013-01-02
    Last Modified (REVDAT):   2013-03-06
     
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    2013-03-06
    Citation
    2013-01-16
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.85
    R-Value: 0.197 (obs.)
    R-Free: 0.248
    Space Group: P 31 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 99.77 α = 90.00 
    b = 99.77 β = 90.00 
    c = 172.37 γ = 120.00