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Irreversible Inhibition of TAK1 Kinase by 5Z-7-Oxozeaenol
4GS6
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase/transferase Inhibitor
    Structure Weight: 36504.26
    Molecule: Tak1-Tab1 fusion protein
    Polymer: 1 Type: protein Length: 315
    Chains: A
    EC#: 2.7.11.25   
    Organism: Homo sapiens
    Gene Names: Gene View for MAP3K7 TAK1 Gene View for TAB1 MAP3K7IP1
    UniProtKB: Protein Feature View | Search PDB | O43318  

    UniProtKB: Protein Feature View | Search PDB | Q15750  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
     
  •   Related PDB Entries Hide
    Identifier Details
    2EVA  Structural basis for the interaction of Tak1 kinase with its activating protein Tab1 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    1FM
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    1FM C19 H22 O7
    (3S,5Z,8S,9S,11E)-8,9,16-trihydroxy-14-methoxy- 3-methyl-3,4,9,10-tetrahydro-1H-2-benzoxacyclotetradecine- 1,7(8H)-dione
    1FM:4GS6
    EDO
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    EDO C2 H6 O2
    1,2-ETHANEDIOL
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    1FM
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    1FM
    IC50: 8 nM (91) - data from BindingDB  
    N/Ain BindingMoad
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Larsen, N.A.,  Ferguson, A.D.,  Wu, J.

    Deposition:   2012-08-27
    Release:   2013-01-23
    Last Modified (REVDAT):   2013-03-27
     
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    2013-03-27
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.20
    R-Value: 0.223 (obs.)
    R-Free: 0.245
    Space Group: I 2 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 58.14 α = 90.00 
    b = 133.87 β = 90.00 
    c = 142.13 γ = 90.00