Complex of a binuclear Ruthenium compound D,D-([mu-(11,11')-bi(dppz)-(1,10-phenanthroline)4-Ru2]4+) bound to d(CGTACG)
DOI:10.2210/pdb4gqj/pdb   NDB ID: NA2051
4GQJ
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  •   Molecular Description Hide
    Classification: DNA
    Structure Weight: 5104.03
    Molecule: DNA (5'-D(*CP*GP*TP*AP*CP*G)-3')
    Polymer: 1 Type: dna Length: 6
    Chains: A, B
     
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  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    3qrn   mononuclear Ru-dppz bound to DNA 
    3s80   mononuclear Ru-dppz bound to DNA 
    3u38   mononuclear Ru-dppz bound to DNA 
    4e1u   mononuclear Ru-dppz bound to DNA 
    4e7y   mononuclear Ru-dppz bound to DNA 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    RR2
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    RR2 C84 H50 N16 Ru2
    (mu-11,11'-bidipyrido[3,2-a:2',3'-c]phenazine- 1kappa~2~N~4~,N~5~:2kappa~2~N~4'~,N~5'~)[tetrakis(1,10- phenanthroline-kappa~2~N~1~,N~10~)]diruthenium
     
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  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:NA2051
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Boer, D.R.,  Coll, M.

    Deposition:   2012-08-23
    Release:   2014-03-05
     
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    No revisions since initial release
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.95
    R-Value: 0.179 (obs.)
    R-Free: 0.206
    Space Group: P 41 3 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 85.43 α = 90.00 
    b = 85.43 β = 90.00 
    c = 85.43 γ = 90.00