POP-OUT | CLOSE
 
Structure of beta-secretase complexed with inhibitor
4GID
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/hydrolase Inhibitor
    Structure Weight: 176144.77
    Molecule: Beta-secretase 1
    Polymer: 1 Type: protein Length: 388
    Chains: A, B, C, D
    EC#: 3.4.23.46   
    Fragment: CATALYTIC DOMAIN
    Organism: Homo sapiens
    Gene Names: Gene View for BACE1 BACE KIAA1149
    UniProtKB: Protein Feature View | Search PDB | P56817  
     
  •   Structure Validation Hide

    Download full validation report    

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1fkn  STRUCTURE OF BETA-SECRETASE COMPLEXED WITH INHIBITOR OM99-2 
    2g94  CRYSTAL STRUCTURE OF BETA-SECRETASE BOUND TO A POTENT AND HIGHLY SELECTIVE INHIBITOR 
    2vkm  CRYSTAL STRUCTURE OF GRL-8234 BOUND TO BACE 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    0GH
    Search 
    Download 
    0GH C35 H47 N5 O6 S
    N-[(2S)-1-({(2S,3R)-3-hydroxy-1-[(2-methylpropyl)amino]- 1-oxobutan-2-yl}amino)-3-phenylpropan-2-yl]- 5-[methyl(methylsulfonyl)amino]-N'-[(1R)- 1-phenylethyl]benzene-1,3-dicarboxamide
    0GH:4GID
    LPD
    Search 
    Download 
    LPD C5 H10 N2 O
    L-PROLINAMIDE
    LPD:4GID
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    0GH
    Search 
    Download 
    0GH
    IC50: >1000 nM (100) - data from BindingDB  
    Ki: 98.8 nM (100) - data from BindingDB  
    Ki: 0.017 nM - data from BindingMOAD  
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers: