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Crystal structure of Topo-78, an N-terminal 78kDa fragment of topoisomerase V
4GFJ
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  •   Molecular Description Hide
    Classification: Isomerase
    Structure Weight: 79018.66
    Molecule: Topoisomerase V
    Polymer: 1 Type: protein Length: 685
    Chains: A
    Fragment: UNP residues 1-685
    Organism: Methanopyrus kandleri AV19
    Gene Name: MK1436
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  •   Source Hide
    Polymer: 1
    Scientific Name: Methanopyrus kandleri av19   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    2CSB  Crystal structure of Topoisomerase V from Methanopyrus kandleri (61 kDa fragment) 
    2CSD  Crystal structure of Topoisomerase V (61 kDa fragment) 
    3M6K  Crystal Structure of N-terminal 44 kDa fragment of topoisomerase V in the presence of guanidium hydrochloride 
    3M6Z  Crystal structure of an N-terminal 44 kDa fragment of topoisomerase V in the presence of guanidium hydrochloride 
    3M7D  Crystal structure of an N-terminal 44 kDA fragment of topoisomerase V in the presence of dioxane 
    3M7G  Structure of topoisomerase domain of topoisomerase V protein 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    GOL
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    GOL C3 H8 O3
    GLYCEROL
    ZN
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    ZN Zn
    ZINC ION
     
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Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Rajan, R.,  Prasad, R.,  Taneja, B.,  Wilson, S.H.,  Mondragon, A.

    Deposition:   2012-08-03
    Release:   2012-12-05
    Last Modified (REVDAT):   2013-01-09
     
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    2013-01-09
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.91
    R-Value: 0.205 (obs.)
    R-Free: 0.267
    Space Group: P 61
    Unit Cell:
      Length [Å] Angles [°]
    a = 161.63 α = 90.00 
    b = 161.63 β = 90.00 
    c = 58.23 γ = 120.00