4F7O

Crystal structure of CSN5

Structural Biology Knowledgebase: 4F7O SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.274
  • R-Value Work: 0.216

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4F7O

Classification: HYDROLASE

Total Structure Weight: 59387.46

Macromolecule Entities
Molecule Chains Length Organism Details
COP9 signalosome complex subunit 5 A, B 257 Homo sapiens EC#: 3.4 IUBMB
Fragment: UNP residues 1-257
Gene Name(s): COPS5 Gene View CSN5 JAB1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SCN
Query on SCN

A, B THIOCYANATE ION
C N S
ZMZDMBWJUHKJPS-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.274
  • R-Value Work: 0.216
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 161.73 α = 90.00
b = 46.51 β = 100.27
c = 71.26 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-05-16
  • Released Date: 2013-01-23
  • Deposition author(s): Echalier, A., Birol, M., Hoh, F., Dumas, C.

Revision History

  • 2013-02-06
    Type: Citation | Details: Citation update