4F57

Fab structure of a neutralizing antibody L1 from an early subtype A HIV-1 infected patient

Structural Biology Knowledgebase: 4F57 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.209
  • R-Value Work: 0.186

Literature

Macromolecules
Sequence Display for 4F57

Classification: IMMUNE SYSTEM

Total Structure Weight: 47024.66

Macromolecule Entities
Molecule Chains Length Organism Details
Light chain of Fab of a neutralizing antibody L1 L 213 Homo sapiens Fragment: light chain of L1
Heavy chain of Fab of a neutralizing antibody L1 H 226 Homo sapiens Fragment: heavy chain of L1

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

H GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.209
  • R-Value Work: 0.186
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 152.10 α = 90.00
b = 57.46 β = 112.78
c = 60.04 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-05-12
  • Released Date: 2013-03-27
  • Deposition author(s): Pan, R.M., Kong, X.P.

Revision History

No revisions since initial release