POP-OUT | CLOSE
 
Human Argonaute-2 - miR-20a complex
DOI:10.2210/pdb4f3t/pdb   NDB ID: NA1773
4F3T
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/rna
    Structure Weight: 104116.25
    Molecule: Protein argonaute-2
    Polymer: 1 Type: protein Length: 861
    Chains: A
    EC#: 3.1.26   
    Organism: Homo sapiens
    Gene Names: Gene View for AGO2 EIF2C2
    UniProtKB: Protein Feature View | Search PDB | Q9UKV8  
    Molecule: RNA (5'-R(P*UP*AP*AP*AP*GP*UP*GP*CP*UP*UP*AP*UP*AP*GP*UP*G*CP*AP*GP*G)-3')
    Polymer: 2 Type: rna Length: 20
    Chains: R
    Fragment: GB bases 8-27
    Details: miR-20a
    Organism: Homo sapiens
     
  •   Structure Validation Hide

    Download full validation report    

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
    Polymer: 2
    Scientific Name: Synthetic construct (Homo sapiens)   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    IPH
    Search 
    Download 
    IPH C6 H6 O
    PHENOL
    IPH:4F3T
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA1773
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Elkayam, E.,  Kuhn, C.-D.,  Tocilj, A.,  Joshua-Tor, L.

    Deposition:   2012-05-09
    Release:   2012-05-30
    Last Modified (REVDAT):   2012-07-25
     
  •   Revision History    Hide
    Mouse over text for details
    2012-07-25
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.25
    R-Value: 0.208 (obs.)
    R-Free: 0.254
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 63.43 α = 90.00 
    b = 107.65 β = 106.69 
    c = 68.72 γ = 90.00