4F0M

UNACTIVATED RUBISCO with MAGNESIUM AND A WATER MOLECULE BOUND

Structural Biology Knowledgebase: 4F0M SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.159

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4F0M

Classification: LYASE

Total Structure Weight: 71675.14

Macromolecule Entities
Molecule Chains Length Organism Details
Ribulose bisphosphate carboxylase large chain A 493 Galdieria sulphuraria EC#: 4.1.1.39 IUBMB
Gene Name(s): rbcL
Ribulose bisphosphate carboxylase small chain B 138 Galdieria sulphuraria EC#: 4.1.1.39 IUBMB
Gene Name(s): rbcS

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
JSmol
GOL
Query on GOL

A, B GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
SNC
Query on SNC
A L-PEPTIDE LINKING C3 H6 N2 O3 S CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.159
  • Space Group: I 4 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 136.32 α = 90.00
b = 136.32 β = 90.00
c = 121.52 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-05-04
  • Released Date: 2012-11-14
  • Deposition author(s): Stec, B.

Revision History

  • 2012-12-12
    Type: Citation | Details: Citation update