4ES6

Crystal structure of HemD (PA5259) from Pseudomonas aeruginosa (PAO1) at 2.22 A resolution

Structural Biology Knowledgebase: 4ES6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.22 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.212

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4ES6

Classification: LYASE

Total Structure Weight: 27659.51

Macromolecule Entities
Molecule Chains Length Organism Details
Uroporphyrinogen-III synthase A 254 Pseudomonas aeruginosa EC#: 4.2.1.75 IUBMB
Gene Name(s): hemD PA5259

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.22 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.212
  • Space Group: P 43 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 132.07 α = 90.00
b = 132.07 β = 90.00
c = 42.44 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-04-22
  • Released Date: 2013-01-09
  • Deposition author(s): Schnell, R., Schneider, G.

Revision History

  • 2013-01-23
    Type: Citation | Details: Citation update
  • 2013-01-09
    Type: Citation | Details: Citation update