4EP4

Thermus thermophilus RuvC structure

Structural Biology Knowledgebase: 4EP4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.28 Å
  • R-Value Free: 0.191
  • R-Value Work: 0.153

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4EP4

Classification: HYDROLASE

Total Structure Weight: 35680.40

Macromolecule Entities
Molecule Chains Length Organism Details
Crossover junction endodeoxyribonuclease RuvC A, B 166 Thermus thermophilus EC#: 3.1.22.4 IUBMB
Gene Name(s): ruvC TTHA1090

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.28 Å
  • R-Value Free: 0.191
  • R-Value Work: 0.153
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 36.78 α = 90.00
b = 51.15 β = 90.00
c = 134.91 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-04-17
  • Released Date: 2012-11-14
  • Deposition author(s): Chen, L., Shi, K., Yin, Z.Q., Aihara, H.

Revision History

  • 2014-12-03
    Type: Entry authorship | Details: --
  • 2013-01-16
    Type: Citation | Details: Citation update
  • 2012-11-14
    Type: Citation | Details: Citation update