Crystal structure of zebrafish plasminogen activator inhibitor-1 (PAI-1)
4DTE
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase Inhibitor
    Structure Weight: 84515.02
    Molecule: Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
    Polymer: 1 Type: protein Length: 374
    Chains: A, B
    Organism: Danio rerio
    Gene Name: serpine1
    UniProtKB: Protein Feature View | Search PDB | F1QRB8  
     
  •   Structure Validation Hide

    View the full validation report  

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Danio rerio   Taxonomy   Common Name: Leopard danio,zebra danio,zebra fish Expression System: Homo sapiens  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    NAG
    Search 
    Download 
    NAG C8 H15 N O6
    N-ACETYL-D-GLUCOSAMINE
    NAG:4DTE
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Johansen, J.S.

    Deposition:   2012-02-21
    Release:   2013-03-27
    Last Modified (REVDAT):   2013-08-21
     
  •   Revision History    Hide
    Mouse over text for details
    2013-08-21
    Entry title
    2013-08-21
    Citation
    2013-08-14
    Citation
    2013-08-07
    Citation
    2013-04-10
    Other
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   1.96
    R-Value: 0.175 (obs.)
    R-Free: 0.219
    Space Group: P 1 21 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 65.16 α = 90.00 
    b = 73.77 β = 102.73 
    c = 91.75 γ = 90.00