The structure of the Box CD enzyme reveals regulation of rRNA methylation
DOI:10.2210/pdb4by9/pdb   NDB ID: 4BY9
4BY9
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase/rna
    Structure Weight: 385924.80
    Molecule: SSR26
    Polymer: 1 Type: rna Length: 72
    Chains: A, B
    Organism: Pyrococcus furiosus
    Molecule: NOP5/NOP56 RELATED PROTEIN
    Polymer: 2 Type: protein Length: 366
    Chains: C, F, I, L
    Fragment: RESIDUES 4-369
    Organism: Pyrococcus furiosus
    Gene Name: PF0060
    UniProtKB: Protein Feature View | Search PDB | Q8U4M1  
    Molecule: 50S RIBOSOMAL PROTEIN L7AE
    Polymer: 3 Type: protein Length: 121
    Chains: D, G, J, M
    Fragment: RESIDUES 3-123
    Organism: Pyrococcus furiosus
    Gene Names: rpl7ae PF1367
    UniProtKB: Protein Feature View | Search PDB | Q8U160  
    Molecule: FIBRILLARIN-LIKE RRNA/TRNA 2'-O-METHYLTRANSFERASE
    Polymer: 4 Type: protein Length: 227
    Chains: E, H, K, N
    EC#: 2.1.1   
    Organism: Pyrococcus furiosus
    Gene Names: flpA PF0059
    UniProtKB: Protein Feature View | Search PDB | Q8U4M2  
    Molecule: 5'-R(*UP*CP*GP*CP*CP*CP*AP*UP*CP*AP*CP)-3'
    Polymer: 5 Type: rna Length: 11
    Chains: W, X, Y, Z
    Organism: Pyrococcus furiosus
     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct (Pyrococcus furiosus)   Taxonomy    
    Polymer: 2
    Scientific Name: Pyrococcus furiosus   Taxonomy   Expression System: Escherichia coli  
    Polymer: 3
    Scientific Name: Pyrococcus furiosus   Taxonomy   Expression System: Escherichia coli  
    Polymer: 4
    Scientific Name: Pyrococcus furiosus   Taxonomy   Expression System: Escherichia coli  
    Polymer: 5
    Scientific Name: Synthetic construct (Pyrococcus furiosus)   Taxonomy    
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:4BY9
     
 
Data in orange boxes are gathered from external resources (when available).
Structure Image
Downloadable viewers: