POP-OUT | CLOSE
 
H5 (VN1194) Influenza Virus Haemagglutinin in Complex with Avian Receptor Analogue 3'-SLN
4BGY
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Viral Protein
    Structure Weight: 58235.32
    Molecule: HEMAGGLUTININ
    Polymer: 1 Type: protein Length: 326
    Chains: A
    Fragment: HA1 OF TRYPSIN RELEASED ECTODOMAIN, RESIDUES 17-340
    Organism: Influenza A virus (A/Vietnam/1194/2004(H5N1))
    Gene Name: HA
    UniProtKB: Protein Feature View | Search PDB | Q6DQ34  
    Molecule: HEMAGGLUTININ
    Polymer: 2 Type: protein Length: 166
    Chains: B
    Fragment: HA2 OF TRYPSIN RELEASED ECTODOMAIN, RESIDUES 347-512
    Organism: Influenza A virus (A/Vietnam/1194/2004(H5N1))
    Gene Name: HA
    UniProtKB: Protein Feature View | Search PDB | Q6DQ34  
     
  •   Structure Validation Hide

    Download full validation report    

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Influenza virus   Taxonomy    
    Polymer: 2
    Scientific Name: Influenza virus   Taxonomy    
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 4
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    4BGW  STRUCTURE OF H5 (VN1194) INFLUENZA HAEMAGGLUTININ 
    4BGX  H5 (VN1194) INFLUENZA VIRUS HAEMAGGLUTININ IN COMPLEX WITH HUMAN RECEPTOR ANALOGUE 6'-SLN 
    4BGZ  CRYSTAL STRUCTURE OF H5 (TYTY) INFLUENZA VIRUS HAEMAGGLUTININ 
    4BH0  H5 (TYTY) INFLUENZA VIRUS HAEMAGGLUTININ IN COMPLEX WITH HUMAN RECEPTOR ANALOGUE 6'-SLN 
    4BH1  H5 (TYTY) INFLUENZA VIRUS HAEMAGGLUTININ IN COMPLEX WITH AVIAN RECEPTOR ANALOGUE 3'-SLN 
    4BH2  CRYSTAL STRUCTURE OF THE HAEMAGGLUTININ FROM A TRANSMISSIBLE MUTANT H5 INFLUENZA VIRUS 
    4BH3  HAEMAGGLUTININ FROM A TRANSMISSIBLE MUTANT H5 INFLUENZA VIRUS IN COMPLEX WITH HUMAN RECEPTOR ANALOGUE 6'-SLN 
    4BH4  HAEMAGGLUTININ FROM A TRANSMISSIBLE MUTANT H5 INFLUENZA VIRUS IN COMPLEX WITH AVIAN RECEPTOR ANALOGUE 3'-SLN 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    EPE
    Search 
    Download 
    EPE C8 H18 N2 O4 S
    4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
    EPE:4BGY
    GAL
    Search 
    Download 
    GAL C6 H12 O6
    BETA-D-GALACTOSE
    GAL:4BGY
    NAG
    Search 
    Download 
    NAG C8 H15 N O6
    N-ACETYL-D-GLUCOSAMINE
    SIA
    Search 
    Download 
    SIA C11 H19 N O9
    O-SIALIC ACID
    SIA:4BGY
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers: