1.25 A Structure of Lysozyme Crystallized with (RS)-2-methyl-2,4- pentanediol
4B4J
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 14638.46
    Molecule: LYSOZYME C
    Polymer: 1 Type: protein Length: 129
    Chains: A
    EC#: 3.2.1.17   
    Organism: Gallus gallus
    Gene Name: Gene View for LYZ
    UniProtKB: Search PDB | P00698   Protein Feature View
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Gallus gallus   Taxonomy   Common Name: Chicken  
     
  •   Related PDB Entries Hide
    Identifier Details
    4B49   1.15 A STRUCTURE OF LYSOZYME CRYSTALLIZED WITHOUT 2- METHYL-2,4-PENTANEDIOL 
    4B4E   1.00 A STRUCTURE OF LYSOZYME CRYSTALLIZED WITH (R)-2 -METHYL-2,4-PENTANEDIOL 
    4B4I   1.20 A STRUCTURE OF LYSOZYME CRYSTALLIZED WITH (S)-2 -METHYL-2,4-PENTANEDIOL 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    CL
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    CL Cl
    CHLORIDE ION
    MRD
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    MRD C6 H14 O2
    (4R)-2-METHYLPENTANE-2,4-DIOL
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Jakoncic, J.,  Berger, J.,  Stauber, M.,  Axelbaum, A.,  Asherie, N.

    Deposition:   2012-07-30
    Release:   2012-08-22
    Last Modified (REVDAT):   2015-03-11
     
  •   Revision History    Hide
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    2015-03-11
    Citation
    2013-03-27
    Atom nomenclature
    2013-03-27
    Other
    2013-03-27
    Geometry validation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.25
    R-Value: 0.132 (obs.)
    R-Free: 0.156
    Space Group: P 43 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 77.67 α = 90.00 
    b = 77.67 β = 90.00 
    c = 37.70 γ = 90.00