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The structure of the Suv4-20h2 ternary complex with histone H4
4AU7
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 59172.77
    Molecule: HISTONE-LYSINE N-METHYLTRANSFERASE SUV420H2
    Polymer: 1 Type: protein Length: 247
    Chains: A, B
    EC#: 2.1.1.43   
    Fragment: SET DOMAIN, RESIDUES 1-246
    Organism: Mus musculus
    Gene Name: Suv420h2
    UniProtKB: Protein Feature View | Search PDB | Q6Q783  
    Molecule: HISTONE H4 PEPTIDE
    Polymer: 2 Type: protein Length: 9
    Chains: C
    Fragment: RESIDUES 18-26
    Organism: Mus musculus
    Gene Names: Hist1h4a Hist1h4b H4-53 Hist1h4c H4-12 Hist1h4d Hist1h4f Hist1h4h Hist1h4i Hist1h4j Hist1h4k Hist1h4m Hist2h4a Hist2h4 Hist4h4
    UniProtKB: Protein Feature View | Search PDB | P62806  
     
  •   Structure Validation Hide

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  •   Source Hide
    Polymer: 1
    Scientific Name: Mus musculus   Taxonomy   Common Name: House mouse Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct (Mus musculus)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1F66  2.6 A CRYSTAL STRUCTURE OF A NUCLEOSOME CORE PARTICLECONTAINING THE VARIANT HISTONE H2A.Z 
    1U35  CRYSTAL STRUCTURE OF THE NUCLEOSOME CORE PARTICLECONTAINING THE HISTONE DOMAIN OF MACROH2A 
    2WP2  STRUCTURE OF BRDT BROMODOMAIN BD1 BOUND TO A DIACETYLATED HISTONE H4 PEPTIDE. 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    EDO
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    EDO C2 H6 O2
    1,2-ETHANEDIOL
    SAH
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    SAH C14 H20 N6 O5 S
    S-ADENOSYL-L-HOMOCYSTEINE
    SAH:4AU7
    ZN
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    ZN Zn
    ZINC ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    MLY
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    MLY C8 H18 N2 O2 LYS lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Southall, S.M.,  Cronin, N.B.,  Wilson, J.R.

    Deposition:   2012-05-14
    Release:   2013-05-22
    Last Modified (REVDAT):   2014-01-15
     
  •   Revision History    Hide
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    2014-01-15
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.07
    R-Value: 0.195 (obs.)
    R-Free: 0.240
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 37.27 α = 90.00 
    b = 65.17 β = 90.00 
    c = 209.49 γ = 90.00