4AU3

Crystal Structure of a Hsp47-collagen complex

Structural Biology Knowledgebase: 4AU3 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.78 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.203

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4AU3

Classification: CHAPERONE / PEPTIDE

Total Structure Weight: 189250.45

Macromolecule Entities
Molecule Chains Length Organism Details
SERPIN PEPTIDASE INHIBITOR, CLADE H (HEAT SHOCK PROTEIN 47 ), MEMBER 1, (COLLAGEN BINDING PROTEIN 1) A, C, D 392 Canis lupus Fragment: RESIDUES 35-418
Details: C-TERMINAL HISTAG
Gene Name(s): SERPINH1 Gene View
SERPYIN PEPTIDASE INHIBITOR, CLADE H (HEAT SHOCK PROTEIN 47 ), MEMBER 1, (COLLAGEN BINDING PROTEIN 1) B 392 Canis lupus Fragment: RESIDUES 35-418
Details: C-TERMINAL HISTAG
Gene Name(s): SERPINH1 Gene View
18ER COLLAGEN MODEL PEPTIDE 15-R8 E, F, G..., H, I, JE, F, G, H, I, J 20 Homo sapiens Details: N-TERMINAL ACETYL GROUP, C-TERMINAL AMIDE
Gene Name(s): COL26A1 Gene View EMID2 EMU2

Small Molecules
Modified Residues 3 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D L-PEPTIDE LINKING C5 H11 N O2 Se MET
ACE
Query on ACE
E, F, G, H, I, J NON-POLYMER C2 H4 O --
NH2
Query on NH2
E, F, G, H, I, J NON-POLYMER H2 N --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.78 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.203
  • Space Group: P 41 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 101.26 α = 90.00
b = 101.26 β = 90.00
c = 366.98 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-05-14
  • Released Date: 2012-08-15
  • Deposition author(s): Widmer, C., Gebauer, J.M., Brunstein, E., Rodenbaum, S., Zaucke, F., Drogemuller, C., Leeb, T., Baumann, U.

Revision History

  • 2012-08-29
    Type: Citation | Details: JRNL