4ALU

Benzofuropyrimidinone Inhibitors of Pim-1

Structural Biology Knowledgebase: 4ALU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.181

Literature

Macromolecules
Sequence Display for 4ALU

Classification: TRANSFERASE

Total Structure Weight: 37942.60

Macromolecule Entities
Molecule Chains Length Organism Details
SERINE/THREONINE-PROTEIN KINASE PIM-1 A 328 Homo sapiens EC#: 2.7.11.1 IUBMB
Mutation: F49S
Gene Name(s): PIM1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
79O
Query on 79O

A 8-bromo-2-(2-chlorophenyl)[1]benzofuro[3,2- d]pyrimidin-4(3H)-one
C16 H8 Br Cl N2 O2
UGRPNQCFWPYERM-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
IMD
Query on IMD

A IMIDAZOLE
C3 H5 N2
RAXXELZNTBOGNW-UHFFFAOYSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
79O IC50: 17 nM (99) BindingDB

N/A in BindingMoad
IC50: 17 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.181
  • Space Group: P 65
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 97.16 α = 90.00
b = 97.16 β = 90.00
c = 81.05 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-03-05
  • Released Date: 2013-01-16
  • Deposition author(s): Stout, T.J., Adams, L.

Revision History

No revisions since initial release