4AJ0

Crystallographic structure of an amyloidogenic variant, 3rCW, of the germinal line lambda 3

Structural Biology Knowledgebase: 4AJ0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.212
  • R-Value Work: 0.174

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4AJ0

Classification: IMMUNE SYSTEM

Total Structure Weight: 45453.34

Macromolecule Entities
Molecule Chains Length Organism Details
GERMINAL LINE LAMBDA 3 3RCW VARIANT A, B, C, D 107 Homo sapiens Fragment: VARIABLE DOMAIN VARIANT OF 3RJL2, RESIDUES 1-107

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ACT
Query on ACT

C ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer
 
JSmol
PG0
Query on PG0

A, C 2-(2-METHOXYETHOXY)ETHANOL
PEG 6000 (Synonym)
C5 H12 O3
SBASXUCJHJRPEV-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.212
  • R-Value Work: 0.174
  • Space Group: P 31
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 41.81 α = 90.00
b = 41.81 β = 90.00
c = 171.04 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-02-15
  • Released Date: 2013-02-27
  • Deposition author(s): Villalba, M.I., Luna, O.D., Rudino-Pinera, E., Sanchez, R., Sanchez-Lopez, R., Rojas-Trejo, S., Olamendi-Portugal, T., Fernandez-Velasco, D.A., Becerril, B.

Revision History

  • 2015-02-11
    Type: Citation | Details: JRNL
  • 2015-01-14
    Type: Citation | Details: JRNL