4A20

Crystal structure of the Ubl domain of Mdy2 (Get5) at 1.78A

Structural Biology Knowledgebase: 4A20 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.78 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.201

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4A20

Classification: PROTEIN BINDING

Total Structure Weight: 11405.07

Macromolecule Entities
Molecule Chains Length Organism Details
UBIQUITIN-LIKE PROTEIN MDY2 A 98 Saccharomyces cerevisiae Fragment: GET5 UBL-LIKE DOMAIN, RESIDUES 70-152
Gene Name(s): MDY2 GET5 TMA24 YOL111C

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.78 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.201
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 47.19 α = 90.00
b = 47.19 β = 90.00
c = 78.41 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-09-21
  • Released Date: 2012-11-14
  • Deposition author(s): Simon, A.C., Simpson, P.J., Murray, J.W., Isaacson, R.L.

Revision History

  • 2013-02-13
    Type: Citation | Details: JRNL
  • 2013-01-30
    Type: Citation | Details: JRNL
  • 2013-01-16
    Type: Citation | Details: JRNL