3ZKU

Isopenicillin N synthase with substrate analogue AhCV

Structural Biology Knowledgebase: 3ZKU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.183
  • R-Value Work: 0.161

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3ZKU

Classification: OXIDOREDUCTASE

Total Structure Weight: 37997.50

Macromolecule Entities
Molecule Chains Length Organism Details
ISOPENICILLIN N SYNTHASE A 331 Aspergillus nidulans EC#: 1.21.3.1 IUBMB
Gene Name(s): ipnA ips AN2622

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FE
Query on FE

A FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
HCV
Query on HCV

A N-[(5S)-5-amino-5-carboxypentanoyl]-L-homocysteyl- D-valine
Delta-L-alpha-aminoadipoyl-L-homocysteinyl- D-valine (Synonym)
C15 H27 N3 O6 S
WDPVNDRNBJNETA-JBLDHEPKSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.183
  • R-Value Work: 0.161
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 46.48 α = 90.00
b = 71.11 β = 90.00
c = 101.04 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-01-24
  • Released Date: 2013-02-06
  • Deposition author(s): Daruzzaman, A., Clifton, I.J., Rutledge, P.J.

Revision History

  • 2013-04-10
    Type: Other | Details: REMARK 900
  • 2013-04-10
    Type: Citation | Details: JRNL
  • 2013-03-20
    Type: Citation | Details: JRNL