3ZI1

Crystal structure of human glyoxalase domain-containing protein 4 (GLOD4)

Structural Biology Knowledgebase: 3ZI1 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.165

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3ZI1

Classification: ISOMERASE

Total Structure Weight: 37157.27

Macromolecule Entities
Molecule Chains Length Organism Details
GLYOXALASE DOMAIN-CONTAINING PROTEIN 4 A 330 Homo sapiens Fragment: RESIDUES 1-272
Mutation: K166N
Gene Name(s): GLOD4 Gene View C17orf25 CGI-150 My027

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.165
  • Space Group: P 21 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 119.29 α = 90.00
b = 42.92 β = 90.00
c = 68.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-12-30
  • Released Date: 2013-01-16
  • Deposition author(s): Oberholzer, A., Kiyani, W., Shrestha, L., Vollmar, M., Krojer, T., Froese, D.S., Williams, E., Von Delft, F., Burgess-Brown, N., Arrowsmith, C.H., Edwards, A., Bountra, C., Yue, W.W.

Revision History

No revisions since initial release