3ZHA

Molecular basis for the action of the collagen-specific chaperone Hsp47 SERPINH1 and its structure-specific client recognition.

Structural Biology Knowledgebase: 3ZHA SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.55 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.195

Literature

Macromolecules
Sequence Display for 3ZHA

Classification: CHAPERONE

Total Structure Weight: 373544.97

Macromolecule Entities
Molecule Chains Length Organism Details
HSP47 A, B, C..., D, K, L, P, QA, B, C, D, K, L, P, Q 392 Canis lupus Fragment: RESIDUES 36-418
Gene Name(s): SERPINH1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
COLLAGEN MODEL PEPTIDE 18-T8R11 E, F, G..., H, I, J, M, N, O, R, S, TE, F, G, H, I, J, M, N, O, R, S, T 19 Synthetic construct

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SIN
Query on SIN

A, C, K, P, Q SUCCINIC ACID
C4 H6 O4
KDYFGRWQOYBRFD-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 2 Unique
ID Chains Type Formula 2D Diagram Parent
ACE
Query on ACE
E, F, G, H, I, J, M, N, O, R, S, T NON-POLYMER C2 H4 O --
NH2
Query on NH2
E, F, G, H, I, J, M, N, O, R, S, T NON-POLYMER H2 N --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.55 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.195
  • Space Group: P 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 102.71 α = 90.00
b = 104.90 β = 103.71
c = 171.84 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-12-20
  • Released Date: 2013-01-09
  • Deposition author(s): Widmer, C., Gebauer, J.M., Baumann, U.
  • Previous versions: 4AWR

Revision History

No revisions since initial release