3W2P

EGFR Kinase domain T790M/L858R mutant with compound 2

Structural Biology Knowledgebase: 3W2P SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.179

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3W2P

Classification: TRANSFERASE / TRANSFERASE INHIBITOR

Total Structure Weight: 38582.31

Macromolecule Entities
Molecule Chains Length Organism Details
Epidermal growth factor receptor A 331 Homo sapiens EC#: 2.7.10.1 IUBMB
Fragment: Kinase domain, UNP residues 698-1022
Mutation: T790M, L858R
Gene Name(s): EGFR Gene View ERBB ERBB1 HER1

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
W2P
Query on W2P

A N-{2-[4-({3-chloro-4-[3-(trifluoromethyl)phenoxy]phenyl}amino)- 5H-pyrrolo[3,2-d]pyrimidin-5-yl]ethyl}-4- (dimethylamino)butanamide
C27 H28 Cl F3 N6 O2
NYVVVTXEFVDYBD-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
W2P N/A in BindingDB
N/A in BindingMoad
IC50: 8100 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.179
  • Space Group: I 2 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 144.98 α = 90.00
b = 144.98 β = 90.00
c = 144.98 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-12-03
  • Released Date: 2013-01-16
  • Deposition author(s): Sogabe, S., Kawakita, Y., Igaki, S.

Revision History

  • 2013-08-21
    Type: Citation | Details: Citation update