3VS8

Crystal structure of type III PKS ArsC

Structural Biology Knowledgebase: 3VS8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.76 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.183

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3VS8

Classification: TRANSFERASE

Total Structure Weight: 361279.84

Macromolecule Entities
Molecule Chains Length Organism Details
Type III polyketide synthase A, B, C..., D, E, F, G, HA, B, C, D, E, F, G, H 410 Azotobacter vinelandii EC#: 2.3.1.74 IUBMB
Gene Name(s): arsC Avin_29530
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NA
Query on NA

A, B, C, D, E, F, G, H SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.76 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.183
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 102.32 α = 90.00
b = 143.39 β = 110.33
c = 129.62 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-04-23
  • Released Date: 2013-04-24
  • Deposition author(s): Satou, R., Miyanaga, A., Ozawa, H., Funa, N., Miyazono, K., Tanokura, M., Ohnishi, Y., Horinouchi, S.

Revision History

  • 2014-04-30
    Type: Citation | Details: Citation update
  • 2013-10-23
    Type: Citation | Details: Citation update