3UM9

Crystal Structure of the Defluorinating L-2-Haloacid Dehalogenase Bpro0530

Structural Biology Knowledgebase: 3UM9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.19 Å
  • R-Value Free: 0.199
  • R-Value Work: 0.144

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3UM9

Classification: HYDROLASE

Total Structure Weight: 51365.72

Macromolecule Entities
Molecule Chains Length Organism Details
Haloacid dehalogenase, type II A, B 230 Polaromonas sp. js666 EC#: 3.8.1.2 IUBMB

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NI
Query on NI

A, B NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.19 Å
  • R-Value Free: 0.199
  • R-Value Work: 0.144
  • Space Group: P 65

Unit Cell:

Length (Å) Angle (°)
a = 96.64 α = 90.00
b = 96.64 β = 90.00
c = 92.03 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-11-12
  • Released Date: 2012-11-14
  • Deposition author(s): Chan, P.W.Y., Savchenko, A., Yakunin, A.F., Edwards, E.A., Pai, E.F.

Revision History

No revisions since initial release