3RGD

Iron loaded frog M ferritin. Short soaking time

Structural Biology Knowledgebase: 3RGD SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.89 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.172

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3RGD

Classification: OXIDOREDUCTASE

Total Structure Weight: 498422.72

Macromolecule Entities
Molecule Chains Length Organism Details
Ferritin, middle subunit A, B, C..., D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, XA, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X 176 Rana catesbeiana EC#: 1.16.3.1 IUBMB
Gene Name(s):

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FE
Query on FE

A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.89 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.172
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 210.74 α = 90.00
b = 210.74 β = 90.00
c = 322.04 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-04-08
  • Released Date: 2012-04-11
  • Deposition author(s): Bertini, I., Lalli, D., Mangani, S., Pozzi, C., Rosa, C., Theil, E.C., Turano, P.

Revision History

  • 2013-07-24
    Type: Citation | Details: Citation update