T. maritima RNase H2 in complex with nucleic acid substrate and calcium ions
DOI:10.2210/pdb3o3g/pdb   NDB ID: NA0636
Primary Citation
  •   Molecular Description Hide
    Classification: Hydrolase/dna RNA Hybrid
    Structure Weight: 32225.07
    Molecule: Ribonuclease HII
    Polymer: 1 Type: protein Length: 222
    Chains: A
    Organism: Thermotoga maritima
    Gene Names: rnhB TM_0915
    UniProtKB: Search PDB | Q9X017   Protein Feature View
    Molecule: DNA (5'-D(*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*C)-3')
    Polymer: 2 Type: dna Length: 12
    Chains: C
    Molecule: DNA/RNA (5'-D(*GP*AP*CP*AP*C)-R(P*C)-D(P*TP*GP*AP*TP*TP*C)-3')
    Polymer: 3 Type: hybrid Length: 12
    Chains: D
  •   Structure Validation Hide

  • MolProbity Ramachandran Plot

  •   Related Citations in PDB Entry (REMARK 1) Hide
  •   Source Hide
    Polymer: 1
    Scientific Name: Thermotoga maritima   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
  •   Related PDB Entries Hide
    Identifier Details
    2etj   apo structure of T. maritima RNase H2 
    3O3F   T. maritima RNase H2 D107N in complex with nucleic acid substrate and magnesium ions 
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    CA Ca
  •   External Domain Annotations Hide
  •   Structural Biology Knowledgebase Data Hide
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:NA0636
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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