3M1E

Crystal Structure of BenM_DBD

Structural Biology Knowledgebase: 3M1E SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.185

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3M1E

Classification: Transcription regulator

Total Structure Weight: 10960.64

Macromolecule Entities
Molecule Chains Length Organism Details
HTH-type transcriptional regulator benM A 94 Acinetobacter sp. adp1 Fragment: DNA BINDING DOMAIN
Gene Name(s): benM benR ACIAD1435
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.185
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 33.36 α = 90.00
b = 84.15 β = 90.00
c = 68.73 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-03-04
  • Released Date: 2011-04-27
  • Deposition author(s): Alanazi, A., Momany, C., Neidle, E.L.

Revision History

  • 2013-07-10
    Type: Citation | Details: --
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4