3L6J

Structure of cinaciguat (bay 58-2667) bound to nostoc H-NOX domain

Structural Biology Knowledgebase: 3L6J SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.150

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3L6J

Classification: SIGNALING PROTEIN

Total Structure Weight: 43559.03

Macromolecule Entities
Molecule Chains Length Organism Details
Alr2278 protein A, B 189 Nostoc sp. pcc 7120 Fragment: residues 1-189
Gene Name(s): alr2278
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
Z90
Query on Z90

A, B 4-({(4-carboxybutyl)[2-(2-{[4-(2-phenylethyl)benzyl]oxy}phenyl)ethyl]amino}methyl)benzoic acid
4-((4-carboxybutyl)(2-((4-phenethylbenzol)oxy) phenethyl) amino)methyl(benzoic) acid) (Synonym)
C36 H39 N O5
WPYWMXNXEZFMAK-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.150
  • Space Group: P 21 3

Unit Cell:

Length (Å) Angle (°)
a = 123.27 α = 90.00
b = 123.27 β = 90.00
c = 123.27 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-12-23
  • Released Date: 2010-05-12
  • Deposition author(s): Martin, F., van den Akker, F.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4