3KS8

Crystal structure of Reston ebolavirus VP35 RNA binding domain in complex with 18bp dsRNA

Structural Biology Knowledgebase: 3KS8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.198

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3KS8

Classification: VIRAL PROTEIN / RNA

Total Structure Weight: 93790.33


Macromolecule Entities
Molecule Chains Length Organism Details
Polymerase cofactor VP35 A, B, C, D 184 Reston ebolavirus Fragment: C-terminal RNA binding domain (UNP residues 160-329)
Gene Name(s): VP35 REBOVgp2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
5'-R(*AP*GP*AP*AP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*A)-3' E 18 synthetic
5'-R(*UP*CP*CP*UP*CP*CP*CP*UP*CP*CP*CP*UP*CP*CP*UP*UP*CP*U)-3' F 18 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.198
  • Space Group: P 31
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 85.68 α = 90.00
b = 85.68 β = 90.00
c = 108.81 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-11-20
  • Released Date: 2010-01-12
  • Deposition author(s): Kimberlin, C.R., Bornholdt, Z.A., Li, S., Woods, V.L., Macrae, I.J., Saphire, E.O.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4