3HVT

STRUCTURAL BASIS OF ASYMMETRY IN THE HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE HETERODIMER

Structural Biology Knowledgebase: 3HVT SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Observed: 0.266

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3HVT

Classification: NUCLEOTIDYLTRANSFERASE

Total Structure Weight: 114327.48

Macromolecule Entities
Molecule Chains Length Organism Details
HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66) A 556 Human immunodeficiency virus 1 EC#: 2.7.7.49 IUBMB
Gene Name(s): gag-pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51) B 428 Human immunodeficiency virus 1 EC#: 2.7.7.49 IUBMB
Gene Name(s): gag-pol

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NVP
Query on NVP

A 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2- B:2',3'-E][1,4]DIAZEPIN-6-ONE
NON-NUCLEOSIDE RT INHIBITOR NEVIRAPINE (Synonym)
C15 H14 N4 O
NQDJXKOVJZTUJA-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
NVP EC50: 20 - >7500 nM (98) BindingDB
IC50: 2.6 - 23000 nM (94 - 99) BindingDB
Ki: 400 - 36000 nM (98 - 99) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Observed: 0.266
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 223.60 α = 90.00
b = 69.90 β = 106.40
c = 105.50 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1994-07-25
  • Released Date: 1994-10-15
  • Deposition author(s): Steitz, T.A., Smerdon, S.J., Jaeger, J., Wang, J., Kohlstaedt, L.A., Chirino, A.J., Friedman, J.M., Rice, P.A.
  • Previous versions: 1HVT 2HVT

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4