3FVM

Crystal structure of Steptococcus suis mannonate dehydratase with metal Mn++

Structural Biology Knowledgebase: 3FVM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.286
  • R-Value Work: 0.234

Literature

Macromolecules
Sequence Display for 3FVM

Classification: Lyase

Total Structure Weight: 86104.88

Macromolecule Entities
Molecule Chains Length Organism Details
Mannonate dehydratase A, B 386 Streptococcus suis EC#: 4.2.1.8 IUBMB
Gene Name(s): uxuA SSU05_1157
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MN
Query on MN

A MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.286
  • R-Value Work: 0.234
  • Space Group: P 43 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 105.69 α = 90.00
b = 105.69 β = 90.00
c = 159.57 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-01-16
  • Released Date: 2009-09-01
  • Deposition author(s): Peng, H., Zhang, Q.J., Gao, F., Liu, Y., Gao, F.G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4