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Candida glabrata Dihydrofolate Reductase complexed with 2,4-diamino-5-[3-methyl-3-(3-methoxy-5-phenylphenyl)prop-1-ynyl]-6-methylpyrimidine(UCP111D) and NADPH
3EEJ
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Oxidoreductase
    Structure Weight: 55062.74
    Molecule: Dihydrofolate reductase
    Polymer: 1 Type: protein Length: 227
    Chains: A, B
    Organism: Candida glabrata
    Gene Name: CAGL0J03894g
    UniProtKB: Protein Feature View | Search PDB | Q6FPH0  
     
  •   Structure Validation Hide

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  •   Source Hide
    Polymer: 1
    Scientific Name: Candida glabrata   Taxonomy   Common Name: Yeast Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    3EEK   
    3EEL   
    3EEM   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    53R
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    53R C22 H22 N4 O
    5-[(3R)-3-(5-methoxybiphenyl-3-yl)but-1-yn- 1-yl]-6-methylpyrimidine-2,4-diamine
    53R:3EEJ
    NDP
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    NDP C21 H30 N7 O17 P3
    NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
    NDP:3EEJ
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    53R
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    53R
    N/Ain BindingDB
    IC50: 7.3 nM - data from BindingMOAD  
    N/Ain PDBbind
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Liu, J.,  Anderson, A.

    Deposition:   2008-09-04
    Release:   2009-08-18
    Last Modified (REVDAT):   2013-11-20
     
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    2013-11-20
    Non-polymer description
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.11
    R-Value: 0.170 (obs.)
    R-Free: 0.229
    Space Group: P 41
    Unit Cell:
      Length [Å] Angles [°]
    a = 42.87 α = 90.00 
    b = 42.87 β = 90.00 
    c = 231.49 γ = 90.00