3C6Z

HNL from Hevea brasiliensis to atomic resolution

Structural Biology Knowledgebase: 3C6Z SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.05 Å
  • R-Value Observed: 0.109

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3C6Z

Classification: LYASE

Total Structure Weight: 29891.48

Macromolecule Entities
Molecule Chains Length Organism Details
Hydroxynitrilase A 257 Hevea brasiliensis EC#: 4.1.2.47 IUBMB
Gene Name(s): HNL

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PEG
Query on PEG

A DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BME
Query on BME

A BETA-MERCAPTOETHANOL
C2 H6 O S
DGVVWUTYPXICAM-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
IPA
Query on IPA

A ISOPROPYL ALCOHOL
2-PROPANOL (Synonym)
C3 H8 O
KFZMGEQAYNKOFK-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.05 Å
  • R-Value Observed: 0.109
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 47.24 α = 90.00
b = 106.37 β = 90.00
c = 128.31 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-02-06
  • Released Date: 2008-06-03
  • Deposition author(s): Schmidt, A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4