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Structure of BVDV1 envelope glycoprotein E2, pH8
2YQ2
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Viral Protein
    Structure Weight: 77644.86
    Molecule: BVDV1 E2
    Polymer: 1 Type: protein Length: 337
    Chains: A, B
    Fragment: BVDV1 E2 ECTODOMAIN, RESIDUES 1-337
    Mutation: YES
    Organism: Bovine viral diarrhea virus 1
    UniProtKB: Protein Feature View | Search PDB | Q01499  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Bovine viral diarrhea virus 1   Taxonomy   Expression System: Homo sapiens  
     
  •   Related PDB Entries Hide
    Identifier Details
    2YQ3  STRUCTURE OF BVDV1 ENVELOPE GLYCOPROTEIN E2, PH5 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    NAG
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    NAG C8 H15 N O6
    N-ACETYL-D-GLUCOSAMINE
    NAG:2YQ2
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   El Omari, K.,  Iourin, O.,  Harlos, K.,  Grimes, J.M.,  Stuart, D.I.

    Deposition:   2012-11-04
    Release:   2013-01-16
    Last Modified (REVDAT):   2013-02-20
     
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    2013-02-20
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.58
    R-Value: 0.241 (obs.)
    R-Free: 0.253
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 132.18 α = 90.00 
    b = 47.59 β = 108.15 
    c = 159.29 γ = 90.00