2X00

CRYSTAL STRUCTURE OF A-ACHBP IN COMPLEX WITH GYMNODIMINE A

Structural Biology Knowledgebase: 2X00 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.180

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2X00

Classification: RECEPTOR

Total Structure Weight: 132259.44

Macromolecule Entities
Molecule Chains Length Organism Details
SOLUBLE ACETYLCHOLINE RECEPTOR A, B, C, E 228 Aplysia californica Fragment: RESIDUES 18-236
Gene Name(s):
SOLUBLE ACETYLCHOLINE RECEPTOR D 227 Aplysia californica Fragment: RESIDUES 18-236
Gene Name(s):

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GYN
Query on GYN

A, B, C, D, E GYMNODIMINE A
C32 H47 N O4
LFQBHRXYGKMZFS-XGHAUHBHSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
GYN N/A in BindingDB
Kd: 0.0047 nM  BindingMOAD
Kd: 0.0047 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.180
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 74.43 α = 90.00
b = 124.32 β = 90.00
c = 130.54 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-12-04
  • Released Date: 2010-03-02
  • Deposition author(s): Bourne, Y., Radic, Z., Araoz, R., Talley, T.T., Benoit, E., Servent, D., Taylor, P., Molgo, J., Marchot, P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4