2W8G

Aplysia californica AChBP bound to in silico compound 35

Structural Biology Knowledgebase: 2W8G SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.200

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2W8G

Classification: RECEPTOR

Total Structure Weight: 124675.73

Macromolecule Entities
Molecule Chains Length Organism Details
SOLUBLE ACETYLCHOLINE RECEPTOR A, B, C, D, E 217 Aplysia californica Fragment: RESIDUES 20-236
Mutation: A41V, A136V
Gene Name(s):

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BS2
Query on BS2

A, D, E (3-ENDO,8-ANTI)-8-BENZYL-3-(10,11-DIHYDRO- 5H-DIBENZO[A,D][7]ANNULEN-5-YLOXY)-8-AZONIABICYCLO[3.2.1]OCTANE
C29 H32 N O
DZOFIEFQFCWGIY-GPOLMCQNSA-O
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
BS2 N/A in BindingDB
N/A in BindingMoad
Ki: 1000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.200
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 134.51 α = 90.00
b = 173.63 β = 90.00
c = 129.12 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-01-16
  • Released Date: 2009-04-14
  • Deposition author(s): Ulens, C., Akdemir, A., Jongejan, A., van Elk, R., Edink, E., Bertrand, S., Perrakis, A., Leurs, R., Smit, A.B., Sixma, T.K., Bertrand, D., de Esch, I.J.

Revision History

  • 2015-03-18
    Type: Data collection | Details: REMARK 200
  • 2011-09-28
    Type: Citation | Details: JRNL
  • 2011-09-28
    Type: Biological assembly | Details: REMARK 350
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor
  • 2011-07-13
    Type: Version format compliance | Details: Compliance with PDBx exchange dictionary V4