POP-OUT | CLOSE
 
Crystal structure of Clostridium histolyticum colg collagenase collagen-binding domain 3B at 1.35 Angstrom resolution in presence of calcium
2O8O
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 27806.37
    Molecule: Collagenase
    Polymer: 1 Type: protein Length: 122
    Chains: A, B
    EC#: 3.4.24.3   
    Fragment: COLLAGEN-BINDING DOMAIN, residues 1003-1118
    Organism: Clostridium histolyticum
    UniProtKB: Protein Feature View | Search PDB | Q9S0X0  
     
  •   Structure Validation Hide

    Download full validation report    

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Clostridium histolyticum   Taxonomy   Expression System: Escherichia coli bl21  
     
  •   Related PDB Entries Hide
    Identifier Details
    1NQD  A Bacterial Collagen-Binding Domain with Novel Calcium-Binding Motif 
    1NQJ  same protein in the absence of calcium 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    CA
    Search 
    Download 
    CA Ca
    CALCIUM ION
    CL
    Search 
    Download 
    CL Cl
    CHLORIDE ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Philominathan, S.T.L.,  Wilson, J.J,  Matsushita, O.,  Sakon, J.

    Deposition:   2006-12-12
    Release:   2007-12-11
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   1.35
    R-Value: 0.147 (obs.)
    R-Free: 0.210
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 40.87 α = 90.00 
    b = 59.17 β = 100.77 
    c = 48.80 γ = 90.00