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CRYSTAL STRUCTURE OF HEPATITIS C VIRUS POLYMERASE IN COMPLEX WITH INHIBITOR SB655264
2JC0
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 128544.30
    Molecule: RNA-DEPENDENT RNA-POLYMERASE
    Polymer: 1 Type: protein Length: 570
    Chains: A, B
    EC#: 2.7.7.48   
    Fragment: RESIDUES 1-570
    Organism: Hepatitis C virus
    UniProtKB: Protein Feature View | Search PDB | P26663  
     
  •   Structure Validation Hide

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  •   Source Hide
    Polymer: 1
    Scientific Name: Hepatitis c virus   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    2I1R  NOVEL THIAZOLONES AS HCV NS5B POLYMERASE INHIBITORS:FURTHER DESIGNS, SYNTHESIS, SAR AND X-RAY COMPLEX STRUCTURE 
    2JC1  CRYSTAL STRUCTURE OF HEPATITIS C VIRUS POLYMERASE IN COMPLEX WITH INHIBITOR SB698223 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    699
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    699 C22 H22 F3 N O5 S
    (2S,4S,5R)-2-ISOBUTYL-5-(2-THIENYL)-1-[4- (TRIFLUOROMETHYL)BENZOYL]PYRROLIDINE-2,4- DICARBOXYLIC ACID
    699:2JC0
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    699
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    699
    IC50: 190 - 300 nM (88) - data from BindingDB  
    IC50: 20000 nM - data from BindingMOAD  
    N/Ain PDBbind
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PQS (software)
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  •   Deposition Summary Hide
    Authors:   Wonacott, A.,  Skarzynski, T.,  Singh, O.M.

    Deposition:   2006-12-18
    Release:   2007-02-13
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.20
    R-Value: 0.184 (obs.)
    R-Free: 0.248
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 85.74 α = 90.00 
    b = 105.89 β = 90.00 
    c = 126.12 γ = 90.00