2I57

Crystal Structure of L-Rhamnose Isomerase from Pseudomonas stutzeri in Complex with D-Allose

Structural Biology Knowledgebase: 2I57 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.97 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.172

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2I57

Classification: ISOMERASE METAL-BINDING PROTEIN

Total Structure Weight: 193264.46

Macromolecule Entities
Molecule Chains Length Organism Details
L-rhamnose isomerase A, B, C, D 438 Pseudomonas stutzeri EC#: 5.3.1.14 IUBMB
Mutation: D150N
Gene Name(s): L-RhI

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AOS
Query on AOS

A, B, C, D D-ALLOSE
C6 H12 O6
GZCGUPFRVQAUEE-BGPJRJDNSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B, C, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.97 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.172
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 74.65 α = 90.00
b = 104.73 β = 108.00
c = 114.53 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-08-24
  • Released Date: 2006-12-19
  • Deposition author(s): Yoshida, H., Yamada, M., Takada, G., Izumori, K., Kamitori, S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4