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Structure of ParB bound to DNA
DOI:10.2210/pdb1zx4/pdb   NDB ID: PD0685
1ZX4
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Translation
    Structure Weight: 60167.90
    Molecule: parS-small DNA centromere site
    Polymer: 1 Type: dna Length: 25
    Chains: T
    Details: W-strand
    Molecule: parS-small DNA centromere site
    Polymer: 2 Type: dna Length: 25
    Chains: S
    Details: C-strand
    Molecule: Plasmid Partition par B protein
    Polymer: 3 Type: protein Length: 192
    Chains: A, B
    Fragment: P1 ParB
    Mutation: residues 142-333
    Organism: Enterobacteria phage P1
    Gene Name: parB
    UniProtKB: Protein Feature View | Search PDB | Q38420  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Enterobacteria phage p1   Taxonomy   Expression System: Escherichia coli  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    CIT
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    CIT C6 H8 O7
    CITRIC ACID
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    MSE
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    MSE C5 H11 N O2 Se MET lPeptideLinking
     
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  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: PD0685
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Schumacher, M.A.,  Funnell, B.E.

    Deposition:   2005-06-06
    Release:   2005-11-29
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.98
    R-Value: 0.248 (obs.)
    R-Free: 0.296
    Space Group: P 62 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 154.60 α = 90.00 
    b = 154.60 β = 90.00 
    c = 132.30 γ = 120.00