1W1W

Sc Smc1hd:Scc1-C complex, ATPgS

Structural Biology Knowledgebase: 1W1W SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.242

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1W1W

Classification: CELL ADHESION

Total Structure Weight: 252599.40

Macromolecule Entities
Molecule Chains Length Organism Details
STRUCTURAL MAINTENANCE OF CHROMOSOME 1 A, B, C, D 430 Saccharomyces cerevisiae Fragment: HEAD DOMAIN RESIDUES 1-214,1024-1225
Details: RESIDUES 1-214, ESSKHPTSLVPRGS LINKER, 1024-1225
Gene Name(s): SMC1 CHL10 YFL008W
SISTER CHROMATID COHESION PROTEIN 1 E, F, G, H 121 Saccharomyces cerevisiae Fragment: C-TERMINAL DOMAIN RESIDUES 451-563
Details: RESIDUES 451-566
Gene Name(s): MCD1 PDS3 RHC21 SCC1 YDL003W YD8119.04

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AGS
Query on AGS

A, B, C, D PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
ATP-GAMMA-S; ADENOSINE 5'-(3-THIOTRIPHOSPHATE); ADENOSINE 5'- (GAMMA-THIOTRIPHOSPHATE); ADENOSINE-5'-DIPHOSPHATE MONOTHIOPHOSPHATE (Synonym)
C10 H16 N5 O12 P3 S
NLTUCYMLOPLUHL-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B, C, D MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.242
  • Space Group: P 43 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 138.46 α = 90.00
b = 138.46 β = 90.00
c = 284.07 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-06-24
  • Released Date: 2004-09-30
  • Deposition author(s): Haering, C., Nasmyth, K., Lowe, J.

Revision History

  • 2013-02-06
    Type: Refinement description | Details: REMARK 3
  • 2013-02-06
    Type: Biological assembly | Details: REMARK 350
  • 2013-02-06
    Type: Binding sites and description | Details: REMARK 800,SITE
  • 2013-02-06
    Type: Atom nomenclature | Details: HETATM
  • 2013-02-06
    Type: Non-polymer description | Details: HET,HETSYN,REMARK 620,FORMUL,HETNAM
  • 2013-02-06
    Type: Linkage | Details: LINK
  • 2013-02-06
    Type: Version format compliance | Details: REMARK 4