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FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH RAT TRYPSIN MUTANT X99RT
1QL9
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 24500.06
    Molecule: TRYPSIN
    Polymer: 1 Type: protein Length: 223
    Chains: A
    EC#: 3.4.21.4   
    Mutation: YES
    Details: VARIANT X99RT\: RAT TRYPSIN CONTAINING THE "99"-LOOP OF FACTOR XA
    Organism: Rattus norvegicus
    Gene Names: Prss2 Try2
    UniProtKB: Protein Feature View | Search PDB | P00763  
     
  •   Structure Validation Hide

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  •   Source Hide
    Polymer: 1
    Scientific Name: Rattus norvegicus   Taxonomy   Common Name: Rat Expression System: Saccharomyces cerevisiae  
     
  •   Related PDB Entries Hide
    Identifier Details
    1MTS  FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN 
    1MTU  FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN 
    1MTV  FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN SEE ALSO THE PDB ENTRIES: 1ANB 1ANC 1AND 1ANE 1AMH 1SLU 1SLV 1SLW 1SLX 1DPO 3TGI 3TGJ 
    1MTW  FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN 
    1QL7  FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN 
    1QL8  FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    CA
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    CA Ca
    CALCIUM ION
    SO4
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    SO4 O4 S
    SULFATE ION
    ZEN
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    ZEN C25 H27 Cl N4 O3 S
    [4-(6-CHLORO-NAPHTHALENE-2-SULFONYL)-PIPERAZIN- 1-YL]- (3,4,5,6-TETRAHYDRO-2H-[1,4']BIPYRIDINYL- 4-YL)- METHANONE
    ZEN:1QL9
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    ZEN
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    ZEN
    N/Ain BindingDB
    Ki: 4450 nM - data from BindingMOAD  
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 generated by PQS (software)
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  •   Deposition Summary Hide
    Authors:   Stubbs, M.T.

    Deposition:   1999-08-24
    Release:   2000-08-25
    Last Modified (REVDAT):   2009-06-02
     
  •   Revision History    Hide
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    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   2.30
    R-Value: 0.189 (obs.)
    R-Free: n/a
    Space Group: I 2 3
    Unit Cell:
      Length [Å] Angles [°]
    a = 124.14 α = 90.00 
    b = 124.14 β = 90.00 
    c = 124.14 γ = 90.00