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BOVINE TRYPSIN 7-[[6-[[1-(1-IMINOETHYL)PIPERIDIN-4-YL]OXY]-2-METHYL-BENZIMIDAZOL-1-YL]METHYL]NAPHTHALENE-2-CARBOXIMIDAMID ZK-806711 INHIBITOR COMPLEX
1QBO
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 23860.14
    Molecule: PROTEIN (TRYPSIN)
    Polymer: 1 Type: protein Length: 223
    Chains: A
    EC#: 3.4.21.4   
    Fragment: BOVINE TRYPSIN
    Organism: Bos taurus
    UniProtKB: Protein Feature View | Search PDB | P00760  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Bos taurus   Taxonomy   Common Name: Cattle  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    711
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    711 C27 H31 N6 O
    7-[[6-[[1-(1-IMINOETHYL)PIPERIDIN-4-YL]OXY]- 2-METHYL-BENZIMIDAZOL-1-YL]METHYL]NAPHTHALENE- 2-CARBOXIMIDAMID
    711:1QBO
    CA
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    CA Ca
    CALCIUM ION
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    711
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    711
    Ki: 18 nM (100) - data from BindingDB  
    Ki: 18 nM - data from BindingMOAD  
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Whitlow, M.

    Deposition:   1999-04-26
    Release:   2000-05-03
    Last Modified (REVDAT):   2014-03-12
     
  •   Revision History    Hide
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    2014-03-12
    Citation
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.80
    R-Value: 0.187 (work)
    R-Free: 0.224
    Space Group: P 31 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 55.02 α = 90.00 
    b = 55.02 β = 90.00 
    c = 109.14 γ = 120.00