1Q5K

crystal structure of Glycogen synthase kinase 3 in complexed with inhibitor

Structural Biology Knowledgebase: 1Q5K SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.94 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.222

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1Q5K

Classification: TRANSFERASE

Total Structure Weight: 92846.42

Macromolecule Entities
Molecule Chains Length Organism Details
Glycogen synthase kinase-3 beta A, B 414 Homo sapiens EC#: 2.7.11.26 IUBMB
Gene Name(s): GSK3B Gene View

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TMU
Query on TMU

A, B N-(4-METHOXYBENZYL)-N'-(5-NITRO-1,3-THIAZOL- 2-YL)UREA
C12 H12 N4 O4 S
YAEMHJKFIIIULI-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
TMU IC50: 41.8 - 330000 nM (100) BindingDB
Ki: 38 - 770 nM (100) BindingDB

Ki: 38 nM  BindingMOAD
Ki: 38 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.94 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.222
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 82.58 α = 90.00
b = 84.91 β = 90.00
c = 178.42 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-08-08
  • Released Date: 2004-08-10
  • Deposition author(s): Bhat, R., Xue, Y., Berg, S., Hellberg, S., Ormo, M., Nilsson, Y., Radesater, A.C., Jerning, E., Markgren, P.O., Borgegard, T., Nylof, M., Gimenez-Cassina, A., Hernandez, F., Lucas, J.J., Diaz-Mido, J., Avila, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4