Effect of Sequence on the Conformational Geometry of DNA Holliday Junctions
DOI:10.2210/pdb1p4y/pdb   NDB ID: UD0028
1P4Y
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA
    Structure Weight: 6185.96
    Molecule: 5'-D(*CP*CP*GP*GP*CP*GP*CP*CP*GP*G)-3'
    Polymer: 1 Type: dna Length: 10
    Chains: A, B
     
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  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1P4Z   Effect of Sequence on the Conformational Geometry of DNA Holliday Junctions 
    1P54   Effect of Sequence on the Conformational Geometry of DNA Holliday Junctions 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    NA
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    NA Na
    SODIUM ION
     
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  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:UD0028
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Hays, F.A.,  Vargason, J.M.,  Ho, P.S.

    Deposition:   2003-04-24
    Release:   2003-09-02
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.70
    R-Value: 0.229 (obs.)
    R-Free: 0.260
    Space Group: C 1 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 66.51 α = 90.00 
    b = 24.18 β = 110.01 
    c = 37.00 γ = 90.00