1MVR

Decoding Center & Peptidyl transferase center from the X-ray structure of the Thermus thermophilus 70S ribosome, aligned to the low resolution Cryo-EM map of E.coli 70S Ribosome

Structural Biology Knowledgebase: 1MVR SBKB.org


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 12.8 Å
  • Aggregation State: Particle
  • Specimen Type: Vitreous Ice (cryo Em)
  • Reconstruction Method: Single Particle

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1MVR

Classification: RIBOSOME

Total Structure Weight: 110230.22


Macromolecule Entities
Molecule Chains Length Organism Details
30S RIBOSOMAL PROTEIN S12 O 135 Escherichia coli Details: based on coordinates from 1GIX, 30S Subunit
Gene Name(s): rpsL TTHA1697
50S ribosomal protein L11 L 140 Escherichia coli Details: based on coordinates from 1GIY, 50S Subunit
Gene Name(s): rplK TM_0454
Macromolecule Entities
Molecule Chains Length Organism Details
mRNA, triplet codon (A-site) 1 3 Escherichia coli based on coordinates from 1GIX, 30S Subunit
Helix 34 of 16S rRNA A 45 Escherichia coli based on coordinates from 1GIX, 30S Subunit
Helix 44 of 16S rRNA B 96 Escherichia coli based on coordinates from 1GIX, 30S Subunit
Helix 69 of 23S rRNA C 19 Escherichia coli based on coordinates from 1GIY, 50S Subunit
Helix 89 of 23S rRNA D 59 Escherichia coli based on coordinates from 1GIY, 50S Subunit
Helix 93 of 23S rRNA E 27 Escherichia coli based on coordinates from 1GIY, 50S Subunit


Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 12.8 Å
  • Aggregation State: Particle
  • Specimen Type: Vitreous Ice (cryo Em)
  • Reconstruction Method: Single Particle

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2002-09-26
  • Released Date: 2003-04-01
  • Deposition author(s): Rawat, U.B., Zavialov, A.V., Sengupta, J., Valle, M., Grassucci, R.A., Linde, J., Vestergaard, B., Ehrenberg, M., Frank, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name